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  5. LOC_Os06g15700.1

LOC_Os06g15700.1 (ATATG2, ATG2, LOC_Os06g15700)


Aliases : ATATG2, ATG2, LOC_Os06g15700

Description : component ATG2 of autophagosome ATG9-2-18 membrane shuttling complex


Gene families : OG0003168 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g15700.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00126p00106330 ATATG2, ATG2,... Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.02 OrthoFinder output from all 47 species
AT3G19190 ATATG2, ATG2 autophagy 2 0.05 OrthoFinder output from all 47 species
Adi_g104707 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Ala_g05089 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Als_g30537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G052200.1 ATATG2, ATG2,... component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.07 OrthoFinder output from all 47 species
Cre09.g408950 ATATG2, ATG2 No description available 0.02 OrthoFinder output from all 47 species
Dde_g05970 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
GSVIVT01031759001 ATATG2, ATG2 Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.1 OrthoFinder output from all 47 species
Gb_39311 ATATG2, ATG2 component ATG2 of autophagosome ATG9-2-18 membrane... 0.09 OrthoFinder output from all 47 species
Lfl_g07446 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.05 OrthoFinder output from all 47 species
MA_10433793g0030 ATATG2, ATG2 component ATG2 of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Nbi_g05017 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Ore_g06569 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Pir_g15809 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Ppi_g08254 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.04 OrthoFinder output from all 47 species
Solyc01g108160.3.1 ATATG2, ATG2,... component ATG2 of autophagosome ATG9-2-18 membrane... 0.08 OrthoFinder output from all 47 species
Zm00001e030944_P001 ATATG2, ATG2,... component ATG2 of autophagosome ATG9-2-18 membrane... 0.1 OrthoFinder output from all 47 species
Zm00001e036789_P001 ATATG2, ATG2,... component ATG2 of autophagosome ATG9-2-18 membrane... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
InterPro domains Description Start Stop
IPR026885 ATG2_mid_RBG 1211 1273
IPR015412 Atg2/VPS13_C 1820 1913
IPR026854 VPS13-like_N 14 110
No external refs found!