LOC_Os06g15330.1 (LOC_Os06g15330)


Aliases : LOC_Os06g15330

Description : transcription factor (BBX-CO)


Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g15330.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00156240 CIA2,... RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Adi_g009638 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21583 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24424 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g17463 No alias BBX class-III transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13738 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18419.t1 Aspi01Gene18419 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07785 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08483 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011897001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
Gb_02486 No alias transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species
Lfl_g06124 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06152 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17180 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_470965g0010 No alias transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
Ore_g09212 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43291 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12347 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34850 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo141010 COL3, ATCOL3 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Zm00001e015732_P002 Zm00001e015732 transcription factor (BBX-CO) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016411 acylglycerol O-acyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 18 60
IPR010402 CCT_domain 391 433
No external refs found!