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  5. LOC_Os06g13030.1

LOC_Os06g13030.1 (WLIM1, LOC_Os06g13030)


Aliases : WLIM1, LOC_Os06g13030

Description : transcription factor (LIM)


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g13030.1

Target Alias Description ECC score Gene Family Method Actions
AT2G45800 No alias GATA type zinc finger transcription factor family protein 0.03 OrthoFinder output from all 47 species
Cba_g04896 No alias LIM-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g05610 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10082 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G067600.1 WLIM1, Ceric.34G067600 LIM-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
GSVIVT01037819001 WLIM1 RNA biosynthesis.transcriptional activation.LIM... 0.07 OrthoFinder output from all 47 species
LOC_Os10g35930.1 LOC_Os10g35930 transcription factor (LIM) 0.04 OrthoFinder output from all 47 species
Nbi_g21254 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50742 No alias LIM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e015234_P001 Zm00001e015234 transcription factor (LIM) 0.04 OrthoFinder output from all 47 species
Zm00001e023098_P001 Zm00001e023098 transcription factor (LIM) 0.03 OrthoFinder output from all 47 species
Zm00001e030885_P002 WLIM1, Zm00001e030885 transcription factor (LIM) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001781 Znf_LIM 13 65
IPR001781 Znf_LIM 112 167
No external refs found!