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  5. LOC_Os06g12780.1

LOC_Os06g12780.1 (DegP9, LOC_Os06g12780)


Aliases : DegP9, LOC_Os06g12780

Description : protease (Deg)


Gene families : OG0000580 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g12780.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00121670 DegP10,... Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder output from all 47 species
Aop_g08011 DegP10 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
MA_9510017g0010 DegP9 protease (Deg) 0.02 OrthoFinder output from all 47 species
Ppi_g41080 DegP10 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR041517 DEGP_PDZ 480 625
IPR001478 PDZ 388 473
No external refs found!