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  5. LOC_Os06g12390.2

LOC_Os06g12390.2 (GALT1, LOC_Os06g12390)


Aliases : GALT1, LOC_Os06g12390

Description : beta-1,3-galactosyltransferase


Gene families : OG0000727 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000727_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g12390.2
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00239510 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AT3G06440 No alias Galactosyltransferase family protein 0.03 OrthoFinder output from all 47 species
Adi_g001612 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.03 OrthoFinder output from all 47 species
Adi_g057289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05479 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.02 OrthoFinder output from all 47 species
Aev_g13060 GALT1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g17641 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.02 OrthoFinder output from all 47 species
Aob_g18100 GALT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64600.t1 Aspi01Gene64600 hydroxyproline O-galactosyltransferase *(GALT) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0114.g046091 GALT1 not classified & original description: CDS=565-2319 0.03 OrthoFinder output from all 47 species
Azfi_s0123.g048384 No alias not classified & original description: CDS=1-2025 0.02 OrthoFinder output from all 47 species
Cba_g23277 GALT1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.22G011500.1 GALT1, Ceric.22G011500 not classified & original description: pacid=50614216... 0.02 OrthoFinder output from all 47 species
Dcu_g05772 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.03 OrthoFinder output from all 47 species
Dcu_g34486 GALT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05968 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.02 OrthoFinder output from all 47 species
Ehy_g07043 GALT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15646 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01011424001 GALT1 Protein modification.N-linked glycosylation.complex... 0.03 OrthoFinder output from all 47 species
Gb_04074 GALT1 beta-1,3-galactosyltransferase. AGP hydroxyproline... 0.03 OrthoFinder output from all 47 species
Nbi_g03741 GALT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29355 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.02 OrthoFinder output from all 47 species
Pir_g16236 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.04 OrthoFinder output from all 47 species
Pnu_g25921 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.03 OrthoFinder output from all 47 species
Ppi_g10307 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012683 GALT1 not classified & original description: CDS=570-2576 0.02 OrthoFinder output from all 47 species
Sam_g14893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo183099 GALT1 Beta-1,3-galactosyltransferase GALT1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc02g070400.3.1 Solyc02g070400 hydroxyproline-O-galactosyltransferase (GALT). AGP... 0.03 OrthoFinder output from all 47 species
Solyc03g113520.3.1 Solyc03g113520 hydroxyproline-O-galactosyltransferase (GALT). AGP... 0.02 OrthoFinder output from all 47 species
Solyc06g071160.3.1 Solyc06g071160 hydroxyproline-O-galactosyltransferase (GALT). AGP... 0.01 OrthoFinder output from all 47 species
Spa_g10316 GALT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04156 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.03 OrthoFinder output from all 47 species
Tin_g05193 GALT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006047_P001 Zm00001e006047 hydroxyproline-O-galactosyltransferase (GALT). AGP... 0.04 OrthoFinder output from all 47 species
Zm00001e017564_P001 Zm00001e017564 AGP hydroxyproline O-galactosyltransferase 0.02 OrthoFinder output from all 47 species
Zm00001e018130_P001 Zm00001e018130 hydroxyproline-O-galactosyltransferase (GALT). AGP... 0.03 OrthoFinder output from all 47 species
Zm00001e030866_P001 GALT1, Zm00001e030866 beta-1,3-galactosyltransferase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004788 thiamine diphosphokinase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009229 thiamine diphosphate biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030975 thiamine binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042357 thiamine diphosphate metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043178 alcohol binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001079 Galectin_CRD 164 356
IPR002659 Glyco_trans_31 401 585
No external refs found!