LOC_Os06g11310.1 (LOC_Os06g11310)


Aliases : LOC_Os06g11310

Description : no hits & (original description: none)


Gene families : OG0005886 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005886_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g11310.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00186140 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Aev_g06410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G025700.1 Ceric.25G025700 not classified & original description: pacid=50594618... 0.04 OrthoFinder output from all 47 species
GSVIVT01031793001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01031794001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_03366 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_32784 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_32785 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Nbi_g08276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo407674 No alias No description available 0.06 OrthoFinder output from all 47 species
Solyc01g108350.4.1 Solyc01g108350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g02989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003245 Phytocyanin_dom 39 134
No external refs found!