1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g08440.1

LOC_Os06g08440.1 (RR12, ARR12, LOC_Os06g08440)


Aliases : RR12, ARR12, LOC_Os06g08440

Description : B-type cytokinin ARR response activator. transcription factor (ARR-B)


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g08440.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00081480 ARR11,... RNA biosynthesis.transcriptional activation.ARR-B... 0.02 OrthoFinder output from all 47 species
AT3G10760 No alias Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g080127 No alias MYB-RELATED transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g12211 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08389 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70563 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00999.t1 RR2, ARR2,... subgroup ARR-B transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene01000.t1 RR14, ARR14,... subgroup ARR-B transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene16230.t1 LUX, PCL1,... component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene58607.t1 MYBC1, Aspi01Gene58607 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g58278 RR12, ARR12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G008700.1 RR12, ARR12,... subgroup ARR-B transcription factor & original... 0.05 OrthoFinder output from all 47 species
Cre02.g094150 APRR9, TL1, PRR9 Two-component response regulator-like APRR9... 0.07 OrthoFinder output from all 47 species
Dac_g02359 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20954 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g40960 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Ehy_g11168 No alias component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
GSVIVT01007550001 ARR11 RNA biosynthesis.transcriptional activation.ARR-B... 0.05 OrthoFinder output from all 47 species
GSVIVT01010300001 ARR11 RNA biosynthesis.transcriptional activation.ARR-B... 0.04 OrthoFinder output from all 47 species
GSVIVT01035051001 ARR1, RR1 RNA biosynthesis.transcriptional activation.ARR-B... 0.04 OrthoFinder output from all 47 species
Lfl_g28555 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02244 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Ore_g08264 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Pir_g00463 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Pir_g25281 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39384 No alias subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06387 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10934 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18223 ARR11 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29793 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.01 OrthoFinder output from all 47 species
Spa_g47334 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Zm00001e028539_P002 ARR11, Zm00001e028539 B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 28 137
IPR001005 SANT/Myb 219 269
No external refs found!