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  5. LOC_Os06g08100.1

LOC_Os06g08100.1 (LOC_Os06g08100)


Aliases : LOC_Os06g08100

Description : no hits & (original description: none)


Gene families : OG0008901 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008901_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g08100.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00175500 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G15760 No alias Sterile alpha motif (SAM) domain-containing protein 0.05 OrthoFinder output from all 47 species
AT1G80520 No alias Sterile alpha motif (SAM) domain-containing protein 0.05 OrthoFinder output from all 47 species
Aspi01Gene70880.t1 Aspi01Gene70880 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37209 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_158232g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Smo420937 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc03g117340.1.1 Solyc03g117340 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc07g007350.1.1 Solyc07g007350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e006769_P001 Zm00001e006769 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e031066_P001 Zm00001e031066 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e037465_P001 Zm00001e037465 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA

No InterPro domains available for this sequence

No external refs found!