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  5. LOC_Os06g07830.1

LOC_Os06g07830.1 (LOC_Os06g07830)


Aliases : LOC_Os06g07830

Description : Putative clathrin assembly protein At5g35200 OS=Arabidopsis thaliana (sp|q9lhs0|cap10_arath : 490.0)


Gene families : OG0000273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g07830.1

Target Alias Description ECC score Gene Family Method Actions
AT5G35200 No alias ENTH/ANTH/VHS superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g080788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01890 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g48862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02242 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04384 No alias accessory protein *(PlCALM3) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0029.g024143 No alias not classified & original description: CDS=1-1854 0.04 OrthoFinder output from all 47 species
Cba_g03939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04015 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04848 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g30673 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029746001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
GSVIVT01035864001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
LOC_Os02g55970.1 LOC_Os02g55970 Putative clathrin assembly protein At5g35200... 0.06 OrthoFinder output from all 47 species
MA_18247g0010 No alias Probable clathrin assembly protein At4g32285... 0.03 OrthoFinder output from all 47 species
Nbi_g06894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07886 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g104870.3.1 Solyc01g104870 ECA1/2 clathrin coated vesicle adaptor protein 0.04 OrthoFinder output from all 47 species
Solyc11g044860.3.1 Solyc11g044860 ECA1/2 clathrin coated vesicle adaptor protein 0.03 OrthoFinder output from all 47 species
Spa_g18247 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013776_P003 Zm00001e013776 ECA1/2 clathrin coated vesicle adaptor protein 0.05 OrthoFinder output from all 47 species
Zm00001e030401_P001 Zm00001e030401 ECA1/2 clathrin coated vesicle adaptor protein 0.06 OrthoFinder output from all 47 species
Zm00001e031059_P001 Zm00001e031059 Putative clathrin assembly protein At5g35200... 0.1 OrthoFinder output from all 47 species
Zm00001e036365_P001 Zm00001e036365 Putative clathrin assembly protein At5g35200... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
CC GO:0046658 obsolete anchored component of plasma membrane IEP HCCA
InterPro domains Description Start Stop
IPR011417 ANTH_dom 35 301
No external refs found!