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Aliases : LOC_Os06g07550
Description : Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana (sp|q9fkc3|pp424_arath : 586.0)
Gene families : OG0002119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002119_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G06430 | EMB2750 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.12 | OrthoFinder output from all 47 species | |
| AT3G53170 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT4G39620 | EMB2453, ATPPR5 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G48730 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g01190 | EMB2453, ATPPR5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g02809 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g08087 | EMB2453, ATPPR5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017677001 | EMB2750 | Pentatricopeptide repeat-containing protein At3g06430,... | 0.13 | OrthoFinder output from all 47 species | |
| GSVIVT01032162001 | No alias | Pentatricopeptide repeat-containing protein At3g53170... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_00230 | No alias | Pentatricopeptide repeat-containing protein At3g06430,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_36199 | EMB2453, ATPPR5 | Pentatricopeptide repeat-containing protein At4g39620,... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_37344 | No alias | Pentatricopeptide repeat-containing protein At5g48730,... | 0.07 | OrthoFinder output from all 47 species | |
| MA_10431478g0010 | No alias | Pentatricopeptide repeat-containing protein At5g48730,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_12518g0010 | EMB2453, ATPPR5 | Pentatricopeptide repeat-containing protein PPR5... | 0.04 | OrthoFinder output from all 47 species | |
| MA_793801g0010 | No alias | Pentatricopeptide repeat-containing protein At3g06430,... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g27398 | EMB2453, ATPPR5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g07398 | EMB2453, ATPPR5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g09304 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g16720 | EMB2453, ATPPR5 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ore_g30371 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0080.g017959 | EMB2453, ATPPR5 | not classified & original description: CDS=1-1101 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g006500.4.1 | Solyc01g006500 | Pentatricopeptide repeat-containing protein At5g48730,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g057200.4.1 | EMB2750, Solyc01g057200 | Pentatricopeptide repeat-containing protein At3g06430,... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g054270.4.1 | EMB2453, ATPPR5,... | Pentatricopeptide repeat-containing protein PPR5... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc08g045780.4.1 | Solyc08g045780 | Pentatricopeptide repeat-containing protein At3g53170... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g098990.2.1 | EMB2750, Solyc12g098990 | Pentatricopeptide repeat-containing protein At3g06430,... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e000106_P001 | Zm00001e000106 | Pentatricopeptide repeat-containing protein At3g53170... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e023883_P001 | EMB2453, ATPPR5,... | Pentatricopeptide repeat-containing protein PPR5,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031052_P001 | Zm00001e031052 | Pentatricopeptide repeat-containing protein At5g48730,... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e032726_P001 | EMB2750, Zm00001e032726 | Pentatricopeptide repeat-containing protein At3g06430,... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:2001070 | starch binding | IEP | HCCA |
| No external refs found! |