1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g06530.1

LOC_Os06g06530.1 (LOC_Os06g06530)


Aliases : LOC_Os06g06530

Description : no hits & (original description: none)


Gene families : OG0005361 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005361_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g06530.1

Target Alias Description ECC score Gene Family Method Actions
AT5G53330 No alias Ubiquitin-associated/translation elongation factor EF1B protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene64173.t1 Aspi01Gene64173 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0043.g026942 No alias not classified & original description: CDS=95-661 0.02 OrthoFinder output from all 47 species
Lfl_g27851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e036438_P001 Zm00001e036438 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!