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  5. LOC_Os06g05990.1

LOC_Os06g05990.1 (LOC_Os06g05990)


Aliases : LOC_Os06g05990

Description : no hits & (original description: none)


Gene families : OG0000599 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000599_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g05990.1

Target Alias Description ECC score Gene Family Method Actions
AT1G08050 No alias Zinc finger (C3HC4-type RING finger) family protein 0.04 OrthoFinder output from all 47 species
Aspi01Gene25613.t1 Aspi01Gene25613 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0233.g059408 No alias not classified & original description: CDS=358-2805 0.03 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.71 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Gb_07921 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os08g03270.1 LOC_Os08g03270 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005076 No alias not classified & original description: CDS=439-2763 0.01 OrthoFinder output from all 47 species
Zm00001e008822_P002 Zm00001e008822 ubiquitin protein ligase (WAV3) 0.02 OrthoFinder output from all 47 species
Zm00001e023647_P001 Zm00001e023647 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!