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  5. LOC_Os06g05804.3

LOC_Os06g05804.3 (LOC_Os06g05804)


Aliases : LOC_Os06g05804

Description : component TRS23 of TRAPP-I/II/III complex-shared components


Gene families : OG0005756 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005756_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g05804.3
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Cre02.g077500 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.02 OrthoFinder output from all 47 species
MA_10433849g0020 No alias component TRS23 of TRAPP-I/II/III complex-shared components 0.03 OrthoFinder output from all 47 species
Ore_g08880 No alias component *(TRS23) of TRAPP-I/II/III complex-shared... 0.03 OrthoFinder output from all 47 species
Solyc01g100840.3.1 Solyc01g100840 component TRS23 of TRAPP-I/II/III complex-shared components 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030008 TRAPP complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR007233 TRAPPC 6 135
No external refs found!