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  5. LOC_Os06g05060.1

LOC_Os06g05060.1 (ELF3, PYK20, LOC_Os06g05060)


Aliases : ELF3, PYK20, LOC_Os06g05060

Description : transcription factor (ELF3). component ELF3 of circadian clock Evening complex (EC)


Gene families : OG0001659 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001659_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g05060.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g014427 No alias component *(ELF3) of circAdian clock Evening complex... 0.04 OrthoFinder output from all 47 species
Adi_g110574 ELF3, PYK20 component *(ELF3) of circAdian clock Evening complex... 0.02 OrthoFinder output from all 47 species
Ala_g27147 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.03 OrthoFinder output from all 47 species
Ala_g33461 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.04 OrthoFinder output from all 47 species
Als_g11965 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.03 OrthoFinder output from all 47 species
Als_g18645 ELF3, PYK20 ELF3-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11979 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.03 OrthoFinder output from all 47 species
Aop_g12876 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.04 OrthoFinder output from all 47 species
Aspi01Gene16189.t1 ELF3, PYK20,... component *(ELF3) of circadian clock Evening complex... 0.03 OrthoFinder output from all 47 species
Aspi01Gene16191.t1 ELF3, PYK20,... ELF3-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48640.t1 ELF3, PYK20,... component *(ELF3) of circadian clock Evening complex... 0.04 OrthoFinder output from all 47 species
Dac_g07054 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.02 OrthoFinder output from all 47 species
Dcu_g23392 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.03 OrthoFinder output from all 47 species
Ehy_g02632 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.02 OrthoFinder output from all 47 species
Len_g02895 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.02 OrthoFinder output from all 47 species
Len_g04835 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.05 OrthoFinder output from all 47 species
Len_g37605 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.02 OrthoFinder output from all 47 species
Nbi_g42973 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.04 OrthoFinder output from all 47 species
Pir_g16093 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.02 OrthoFinder output from all 47 species
Pir_g50977 No alias component *(ELF3) of circadian clock Evening complex... 0.02 OrthoFinder output from all 47 species
Solyc12g095900.2.1 ELF3, PYK20,... transcription factor (ELF3). component ELF3 of circadian... 0.02 OrthoFinder output from all 47 species
Tin_g08686 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.02 OrthoFinder output from all 47 species
Zm00001e020471_P001 ELF3, PYK20,... transcription factor (ELF3). component ELF3 of circadian... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!