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  5. LOC_Os06g04460.1

LOC_Os06g04460.1 (LOC_Os06g04460)


Aliases : LOC_Os06g04460

Description : Hypersensitive-induced response protein 4 OS=Arabidopsis thaliana (sp|q9fhm7|hir4_arath : 440.0)


Gene families : OG0000609 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000609_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g04460.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene26388.t1 ATHIR1, HIR1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16123 ATHIR1, HIR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02167 ATHIR1, HIR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24767 ATHIR1, HIR1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_437437g0010 ATHIR1, HIR1 Hypersensitive-induced response protein-like protein 1... 0.02 OrthoFinder output from all 47 species
Nbi_g04082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08394 ATHIR1, HIR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16954 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR001107 Band_7 12 183
No external refs found!