LOC_Os06g03830.1 (LOC_Os06g03830)


Aliases : LOC_Os06g03830

Description : Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana (sp|a2rvm0|tic32_arath : 192.0)


Gene families : OG0000190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g03830.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00082650 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
AMTR_s00085p00054430 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
AMTR_s00107p00149370 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
AT1G64590 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G24050 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G50130 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g006972 No alias component *(Tic32) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Adi_g011022 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24820 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11538 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06314.t1 Aspi01Gene06314 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16465.t1 Aspi01Gene16465 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16465.t2 Aspi01Gene16465 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24658.t1 Aspi01Gene24658 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0265.g060946 No alias not classified & original description: CDS=567-1532 0.02 OrthoFinder output from all 47 species
Cba_g03034 No alias component *(Tic32) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Cba_g34229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.33G014400.1 Ceric.33G014400 not classified & original description: pacid=50607635... 0.03 OrthoFinder output from all 47 species
Dac_g23691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25457 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g39419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12374 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01028900001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.09 OrthoFinder output from all 47 species
Lfl_g17256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_125991g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species
Nbi_g40152 No alias component *(Tic32) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Ore_g36255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23484 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10478 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo228800 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
Smo420551 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
Smo421434 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
Smo445059 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
Solyc10g086390.2.1 Solyc10g086390 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species
Spa_g46897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g32213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016903_P001 Zm00001e016903 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 OrthoFinder output from all 47 species
Zm00001e036623_P001 Zm00001e036623 Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 37 179
No external refs found!