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  5. LOC_Os06g02640.1

LOC_Os06g02640.1 (LOC_Os06g02640)


Aliases : LOC_Os06g02640

Description : no hits & (original description: none)


Gene families : OG0001679 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001679_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g02640.1
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00197000 evm_27.TU.AmTr_v1... Putative ripening-related protein 1 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
AMTR_s00005p00207640 evm_27.TU.AmTr_v1... Ripening-related protein grip22 OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
AMTR_s00005p00208720 evm_27.TU.AmTr_v1... Ripening-related protein grip22 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
Aspi01Gene22043.t1 Aspi01Gene22043 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G075200.1 Ceric.32G075200 not classified & original description: pacid=50598080... 0.03 OrthoFinder output from all 47 species
Ceric.32G075300.1 Ceric.32G075300 not classified & original description: pacid=50597616... 0.02 OrthoFinder output from all 47 species
Ehy_g11809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g42450.1 LOC_Os02g42450 Putative ripening-related protein 2 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os10g34760.1 LOC_Os10g34760 Putative ripening-related protein 6 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Len_g44254 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g49301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g21539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g33994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g33995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g34399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c5_25540V3.1 Pp3c5_25540 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g14987 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo99218 No alias Ripening-related protein grip22 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
Zm00001e004506_P001 Zm00001e004506 Putative ripening-related protein 6 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!