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  5. LOC_Os06g01780.1

LOC_Os06g01780.1 (LOC_Os06g01780)


Aliases : LOC_Os06g01780

Description : peptidase (PPPDE)


Gene families : OG0002455 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002455_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g01780.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AT4G25680 No alias PPPDE putative thiol peptidase family protein 0.03 OrthoFinder output from all 47 species
Adi_g016355 No alias deubiquitinase *(PICI1) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018412 No alias deubiquitinase *(PICI1) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07096 No alias deubiquitinase *(PICI1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02050 No alias deubiquitinase *(PICI1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49831.t1 Aspi01Gene49831 deubiquitinase *(PICI1) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21430 No alias deubiquitinase *(PICI1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028868001 No alias Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Nbi_g20700 No alias deubiquitinase *(PICI1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04184 No alias deubiquitinase *(PICI1) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11036 No alias deubiquitinase *(PICI1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00869 No alias deubiquitinase *(PICI1) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021965 No alias deubiquitinase *(PICI1) & original description: CDS=220-924 0.02 OrthoFinder output from all 47 species
Spa_g25036 No alias deubiquitinase *(PICI1) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51197 No alias deubiquitinase *(PICI1) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008580 PPPDE_dom 14 162
No external refs found!