1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g51820.1

LOC_Os05g51820.1 (MUTE, LOC_Os05g51820)


Aliases : MUTE, LOC_Os05g51820

Description : transcription factor (bHLH)


Gene families : OG0000768 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000768_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g51820.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00015p00239460 SPCH,... RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
Aspi01Gene18861.t1 FMA, Aspi01Gene18861 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29143.t1 FMA, Aspi01Gene29143 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60129.t1 FMA, Aspi01Gene60129 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_34544 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_194157g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e000161_P002 Zm00001e000161 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e014279_P001 SPCH, Zm00001e014279 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e024824_P001 SPCH, Zm00001e024824 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e026696_P001 MUTE, Zm00001e026696 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e037075_P001 SPCH, Zm00001e037075 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 2 50
No external refs found!