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  5. LOC_Os05g51660.1

LOC_Os05g51660.1 (LOC_Os05g51660)


Aliases : LOC_Os05g51660

Description : Pathogenesis-related protein 1B OS=Nicotiana tabacum (sp|p07053|pr1b_tobac : 96.7)


Gene families : OG0000174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000174_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g51660.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00244110 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.05 OrthoFinder output from all 47 species
AT1G01310 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 OrthoFinder output from all 47 species
AT3G09590 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.05 OrthoFinder output from all 47 species
AT3G19690 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 OrthoFinder output from all 47 species
AT4G25780 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 OrthoFinder output from all 47 species
AT5G02730 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.05 OrthoFinder output from all 47 species
Cba_g55363 No alias CAPE precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Cre01.g011630 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g27002 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Gb_11042 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 OrthoFinder output from all 47 species
LOC_Os12g43700.1 LOC_Os12g43700 Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
MA_150049g0010 No alias Basic form of pathogenesis-related protein 1... 0.03 OrthoFinder output from all 47 species
Pir_g35143 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c25_120V3.1 Pp3c25_120 CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.01 OrthoFinder output from all 47 species
Solyc01g106600.2.1 Solyc01g106600 Basic form of pathogenesis-related protein 1... 0.05 OrthoFinder output from all 47 species
Solyc08g068990.2.1 Solyc08g068990 Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Zm00001e026690_P001 Zm00001e026690 Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.08 OrthoFinder output from all 47 species
Zm00001e032607_P001 Zm00001e032607 Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR014044 CAP_domain 61 183
No external refs found!