LOC_Os05g51650.1 (LOC_Os05g51650)

Aliases : LOC_Os05g51650

Description : component LSm8 of U6-associated LSm accessory ribonucleoprotein complex

Gene families : OG0008386 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008386_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g51650.1
Cluster	HCCA: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
Cre02.g142850	No alias	RNA processing.RNA splicing.U6-associated LSm accessory...	0.02	OrthoFinder output from all 47 species
GSVIVT01024237001	No alias	RNA processing.RNA splicing.U6-associated LSm accessory...	0.03	OrthoFinder output from all 47 species
Mp4g00350.1	No alias	component LSm8 of U6-associated LSm accessory...	0.01	OrthoFinder output from all 47 species
Pp3c5_26940V3.1	Pp3c5_26940	Small nuclear ribonucleoprotein family protein	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001163	LSM_dom_euk/arc	8	116

External Links

No external refs found!