LOC_Os05g51550.1 (LOC_Os05g51550)


Aliases : LOC_Os05g51550

Description : Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana (sp|f4j7t2|eaf1b_arath : 142.0)


Gene families : OG0001880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001880_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g51550.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00026940 evm_27.TU.AmTr_v1... Chromatin modification-related protein EAF1 A... 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00028830 evm_27.TU.AmTr_v1... Chromatin modification-related protein EAF1 B... 0.04 OrthoFinder output from all 47 species
AT3G24870 No alias Helicase/SANT-associated, DNA binding protein 0.03 OrthoFinder output from all 47 species
AT3G24880 No alias Helicase/SANT-associated, DNA binding protein 0.04 OrthoFinder output from all 47 species
Adi_g107358 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.03 OrthoFinder output from all 47 species
Adi_g112779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20989 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.05 OrthoFinder output from all 47 species
Aop_g08156 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.06 OrthoFinder output from all 47 species
Azfi_s0006.g009719 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.03 OrthoFinder output from all 47 species
Azfi_s0384.g067472 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.04 OrthoFinder output from all 47 species
Cba_g32209 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z107100.1 Ceric.1Z107100 component *(EAF1) of NuA4 histone acetyltransferase... 0.05 OrthoFinder output from all 47 species
Dcu_g44993 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.08 OrthoFinder output from all 47 species
Ehy_g16159 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.03 OrthoFinder output from all 47 species
GSVIVT01028685001 No alias Chromatin modification-related protein EAF1 A... 0.05 OrthoFinder output from all 47 species
Gb_03424 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.07 OrthoFinder output from all 47 species
Gb_31226 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.1 OrthoFinder output from all 47 species
Len_g14156 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.04 OrthoFinder output from all 47 species
MA_118641g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_31176g0010 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.05 OrthoFinder output from all 47 species
Mp2g02900.1 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.1 OrthoFinder output from all 47 species
Ore_g18801 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.02 OrthoFinder output from all 47 species
Pir_g12255 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.04 OrthoFinder output from all 47 species
Pir_g54225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c26_13463V3.1 Pp3c26_13463 Helicase/SANT-associated, DNA binding protein 0.04 OrthoFinder output from all 47 species
Pp3c4_31630V3.1 Pp3c4_31630 Helicase/SANT-associated, DNA binding protein 0.02 OrthoFinder output from all 47 species
Ppi_g42118 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.04 OrthoFinder output from all 47 species
Sam_g36096 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.05 OrthoFinder output from all 47 species
Smo424802 No alias Chromatin modification-related protein EAF1 B... 0.05 OrthoFinder output from all 47 species
Solyc06g083420.3.1 Solyc06g083420 component EAF1 of NuA4 histone acetyltransferase complex 0.02 OrthoFinder output from all 47 species
Solyc09g060080.4.1 Solyc09g060080 component EAF1 of NuA4 histone acetyltransferase complex 0.03 OrthoFinder output from all 47 species
Spa_g42104 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.02 OrthoFinder output from all 47 species
Tin_g13754 No alias component *(EAF1) of NuA4 histone acetyltransferase... 0.03 OrthoFinder output from all 47 species
Zm00001e020520_P002 Zm00001e020520 component EAF1 of NuA4 histone acetyltransferase complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!