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  5. LOC_Os05g50230.1

LOC_Os05g50230.1 (LOC_Os05g50230)


Aliases : LOC_Os05g50230

Description : no hits & (original description: none)


Gene families : OG0009517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g50230.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AT1G23710 No alias Protein of unknown function (DUF1645) 0.03 OrthoFinder output from all 47 species
AT1G70420 No alias Protein of unknown function (DUF1645) 0.05 OrthoFinder output from all 47 species
GSVIVT01032463001 No alias No description available 0.04 OrthoFinder output from all 47 species
Pir_g24889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g024780.1.1 Solyc04g024780 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e020252_P001 Zm00001e020252 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e020361_P001 Zm00001e020361 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e027955_P001 Zm00001e027955 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012442 DUF1645_plant 63 283
No external refs found!