1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g50140.2

LOC_Os05g50140.2 (PIN3, ATPIN3, LOC_Os05g50140)


Aliases : PIN3, ATPIN3, LOC_Os05g50140

Description : auxin transporter (PIN). auxin efflux transporter (PIN)


Gene families : OG0000569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g50140.2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00241000 PIN5,... Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00250330 EIR1, WAV6,... Solute transport.carrier-mediated transport.BART... 0.06 OrthoFinder output from all 47 species
AMTR_s00038p00074690 ATPIN1, PIN1,... Solute transport.carrier-mediated transport.BART... 0.05 OrthoFinder output from all 47 species
AMTR_s00038p00079560 PIN7, ATPIN7,... Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder output from all 47 species
AMTR_s00101p00149240 ATPIN1, PIN1,... Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
AT2G01420 ATPIN4, PIN4 Auxin efflux carrier family protein 0.02 OrthoFinder output from all 47 species
AT5G16530 PIN5 Auxin efflux carrier family protein 0.03 OrthoFinder output from all 47 species
Adi_g011681 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081464 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08758 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g13338 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26968 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15414 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g08211 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33596 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008430001 ATPIN1, PIN1 Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder output from all 47 species
GSVIVT01019125001 No alias Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
Gb_37787 ATPIN4, PIN4 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Lfl_g12533 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433084g0010 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Ppi_g02383 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26841 No alias auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g056620.2.1 PIN5, Solyc04g056620 auxin transporter (PIN). auxin efflux transporter (PIN) 0.06 OrthoFinder output from all 47 species
Solyc05g008060.4.1 PIN3, ATPIN3,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Solyc10g078370.2.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Zm00001e010118_P004 PIN5, Zm00001e010118 auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Zm00001e036089_P001 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Zm00001e036414_P001 ATPIN4, PIN4,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004776 Mem_trans 10 585
No external refs found!