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  5. LOC_Os05g49740.1

LOC_Os05g49740.1 (EMB2744, LOC_Os05g49740)


Aliases : EMB2744, LOC_Os05g49740

Description : Pentatricopeptide repeat-containing protein At5g39680 OS=Arabidopsis thaliana (sp|q9fk93|pp406_arath : 581.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g49740.1
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00263110 No alias Pentatricopeptide repeat-containing protein At1g03540... 0.03 OrthoFinder output from all 47 species
AMTR_s00056p00185560 VAC1, ECB2, ATECB2 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00063p00172440 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
AMTR_s00103p00160020 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
AMTR_s00170p00032020 OTP86,... Pentatricopeptide repeat-containing protein At5g16860... 0.06 OrthoFinder output from all 47 species
AMTR_s03531p00004900 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g02330,... 0.04 OrthoFinder output from all 47 species
AT1G06140 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.1 OrthoFinder output from all 47 species
AT1G09410 No alias pentatricopeptide (PPR) repeat-containing protein 0.05 OrthoFinder output from all 47 species
AT1G69350 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT2G20540 MEF21 mitochondrial editing factor 21 0.03 OrthoFinder output from all 47 species
AT2G27610 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G41080 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G01580 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G08820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G28660 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G49142 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G21300 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G37570 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G39680 EMB2744 Pentatricopeptide repeat (PPR) superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G40410 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G46460 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g033736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g033814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g26256 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g35879 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36191 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g19927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03408 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19351 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33022 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68113 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03412.t2 Aspi01Gene03412 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31801.t1 Aspi01Gene31801 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g024030 No alias not classified & original description: CDS=1-1224 0.03 OrthoFinder output from all 47 species
Azfi_s0069.g036568 No alias not classified & original description: CDS=1-2256 0.03 OrthoFinder output from all 47 species
Cba_g03375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05330 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07270 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07408 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07727 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20714 LOI1, MEF11 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24198 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32456 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32896 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45888 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g66427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67693 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67804 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G121800.1 Ceric.01G121800 not classified & original description: pacid=50593016... 0.06 OrthoFinder output from all 47 species
Ceric.13G057700.1 Ceric.13G057700 not classified & original description: pacid=50635307... 0.04 OrthoFinder output from all 47 species
Ceric.25G070000.1 VAC1, ECB2,... not classified & original description: pacid=50593626... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.28 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.04 OrthoFinder output from all 47 species
Dac_g06472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18422 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19095 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g40077 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g46281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04416 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12887 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000244001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01000936001 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
GSVIVT01000968001 No alias Putative pentatricopeptide repeat-containing protein... 0.09 OrthoFinder output from all 47 species
GSVIVT01004939001 RARE1 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01008757001 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.04 OrthoFinder output from all 47 species
GSVIVT01009866001 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.03 OrthoFinder output from all 47 species
GSVIVT01009976001 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
GSVIVT01010125001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01011887001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
GSVIVT01015233001 EMB2261 Pentatricopeptide repeat-containing protein DOT4,... 0.09 OrthoFinder output from all 47 species
GSVIVT01017996001 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species
GSVIVT01018018001 No alias Pentatricopeptide repeat-containing protein At3g22690... 0.04 OrthoFinder output from all 47 species
GSVIVT01019231001 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.14 OrthoFinder output from all 47 species
GSVIVT01021023001 No alias RNA processing.organelle machineries.RNA... 0.1 OrthoFinder output from all 47 species
GSVIVT01022230001 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
GSVIVT01023644001 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.03 OrthoFinder output from all 47 species
GSVIVT01024912001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
GSVIVT01026141001 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.1 OrthoFinder output from all 47 species
GSVIVT01027839001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01030248001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01032994001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01033004001 No alias Pentatricopeptide repeat-containing protein At3g26782,... 0.04 OrthoFinder output from all 47 species
GSVIVT01033304001 CRR28 Pentatricopeptide repeat-containing protein At2g02980,... 0.04 OrthoFinder output from all 47 species
GSVIVT01033837001 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
GSVIVT01035491001 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
GSVIVT01036010001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01036788001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.13 OrthoFinder output from all 47 species
GSVIVT01037258001 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.06 OrthoFinder output from all 47 species
Gb_07106 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_07442 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Gb_08671 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_12372 CRR22 RNA editing factor (OTP82) 0.06 OrthoFinder output from all 47 species
Gb_17092 CRR22 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Gb_18462 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Gb_23320 CRR22 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Gb_24823 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Gb_32256 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.04 OrthoFinder output from all 47 species
Gb_33311 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Gb_36839 OTP84 Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
Gb_38068 OTP86 RNA editing factor (OTP82) 0.02 OrthoFinder output from all 47 species
Gb_38417 CRR2 OTP70 plastidial RNA splicing factor 0.03 OrthoFinder output from all 47 species
LOC_Os03g08680.1 LOC_Os03g08680 Pentatricopeptide repeat-containing protein DOT4,... 0.05 OrthoFinder output from all 47 species
Len_g02338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04831 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g07224 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17734 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17972 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23462 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g33495 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g33510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54328 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58768 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_100287g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
MA_10138132g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.04 OrthoFinder output from all 47 species
MA_109134g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_11765g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_122546g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_122899g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
MA_138689g0010 OTP84 Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
MA_187514g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_211508g0010 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.06 OrthoFinder output from all 47 species
MA_25729g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.07 OrthoFinder output from all 47 species
MA_27726g0010 VAC1, ECB2, ATECB2 RNA editing factor (ECB2/VAC1) 0.03 OrthoFinder output from all 47 species
MA_32723g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
MA_41676g0020 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.04 OrthoFinder output from all 47 species
MA_53781g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.07 OrthoFinder output from all 47 species
MA_6527g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_71420g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
MA_73895g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
MA_74986g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_812716g0010 EMB2758 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
MA_8210920g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
MA_953793g0020 DOT4 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
MA_956160g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.04 OrthoFinder output from all 47 species
MA_961981g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
Msp_g03575 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g04473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28213 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32360 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41336 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46049 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g48594 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05446 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g19044 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g19074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23638 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g25096 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27843 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02495 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15455 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g11016 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56752 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002988 No alias not classified & original description: CDS=1-2412 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003527 EMB2758 not classified & original description: CDS=1-1284 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004479 No alias not classified & original description: CDS=197-3106 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008533 No alias not classified & original description: CDS=1-2436 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014208 No alias not classified & original description: CDS=1-2511 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015714 CRR22 not classified & original description: CDS=1-1887 0.04 OrthoFinder output from all 47 species
Sam_g14863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27497 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo34426 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.04 OrthoFinder output from all 47 species
Solyc02g065030.1.1 EMB2758, Solyc02g065030 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Solyc02g076700.1.1 Solyc02g076700 Pentatricopeptide repeat-containing protein At4g02750... 0.1 OrthoFinder output from all 47 species
Solyc02g079260.2.1 Solyc02g079260 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Solyc02g082160.2.1 CRR22, Solyc02g082160 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Solyc03g098420.3.1 Solyc03g098420 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Solyc04g074160.3.1 Solyc04g074160 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc05g046280.3.1 Solyc05g046280 RNA editing factor (MEF13) 0.03 OrthoFinder output from all 47 species
Solyc06g062610.2.1 Solyc06g062610 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc06g064600.1.1 Solyc06g064600 Pentatricopeptide repeat-containing protein At1g56690,... 0.05 OrthoFinder output from all 47 species
Solyc06g068810.4.1 Solyc06g068810 Pentatricopeptide repeat-containing protein At5g50990... 0.04 OrthoFinder output from all 47 species
Solyc07g053520.2.1 SLO1, Solyc07g053520 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Solyc09g065710.1.1 OTP86, Solyc09g065710 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species
Solyc09g090220.3.1 Solyc09g090220 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc11g017290.1.1 Solyc11g017290 Pentatricopeptide repeat-containing protein At1g31430... 0.05 OrthoFinder output from all 47 species
Solyc11g040060.3.1 EMB2758, Solyc11g040060 Pentatricopeptide repeat-containing protein At4g33990... 0.04 OrthoFinder output from all 47 species
Spa_g06014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56176 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001918_P001 EMB2758, Zm00001e001918 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
Zm00001e003284_P001 Zm00001e003284 Putative pentatricopeptide repeat-containing protein... 0.07 OrthoFinder output from all 47 species
Zm00001e007597_P001 Zm00001e007597 Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Zm00001e008183_P001 Zm00001e008183 Putative pentatricopeptide repeat-containing protein... 0.07 OrthoFinder output from all 47 species
Zm00001e008200_P001 Zm00001e008200 Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Zm00001e011519_P001 Zm00001e011519 Pentatricopeptide repeat-containing protein At4g21065... 0.05 OrthoFinder output from all 47 species
Zm00001e012607_P002 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e014800_P001 OTP82, Zm00001e014800 Pentatricopeptide repeat-containing protein At2g29760,... 0.05 OrthoFinder output from all 47 species
Zm00001e018565_P001 Zm00001e018565 Pentatricopeptide repeat-containing protein At3g13880... 0.05 OrthoFinder output from all 47 species
Zm00001e019971_P001 Zm00001e019971 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e020567_P001 Zm00001e020567 RNA editing factor (MEF7) 0.04 OrthoFinder output from all 47 species
Zm00001e020583_P001 Zm00001e020583 Pentatricopeptide repeat-containing protein At2g33680... 0.08 OrthoFinder output from all 47 species
Zm00001e022858_P001 Zm00001e022858 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Zm00001e023333_P001 Zm00001e023333 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e023504_P001 CRR22, Zm00001e023504 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Zm00001e025557_P001 Zm00001e025557 Pentatricopeptide repeat-containing protein At5g56310... 0.08 OrthoFinder output from all 47 species
Zm00001e028330_P001 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Zm00001e030553_P001 Zm00001e030553 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e030887_P001 Zm00001e030887 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e031693_P001 Zm00001e031693 Pentatricopeptide repeat-containing protein At4g14050,... 0.04 OrthoFinder output from all 47 species
Zm00001e033171_P001 Zm00001e033171 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Zm00001e035419_P001 Zm00001e035419 Pentatricopeptide repeat-containing protein At1g25360... 0.04 OrthoFinder output from all 47 species
Zm00001e041246_P001 Zm00001e041246 Pentatricopeptide repeat-containing protein At3g53360,... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 520 549
IPR002885 Pentatricopeptide_repeat 353 379
IPR002885 Pentatricopeptide_repeat 454 476
IPR002885 Pentatricopeptide_repeat 53 80
IPR002885 Pentatricopeptide_repeat 181 208
IPR002885 Pentatricopeptide_repeat 150 173
IPR002885 Pentatricopeptide_repeat 85 105
IPR002885 Pentatricopeptide_repeat 380 427
IPR002885 Pentatricopeptide_repeat 278 326
IPR032867 DYW_dom 553 676
No external refs found!