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  5. LOC_Os05g49180.1

LOC_Os05g49180.1 (LOC_Os05g49180)


Aliases : LOC_Os05g49180

Description : no hits & (original description: none)


Gene families : OG0000712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000712_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g49180.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00072820 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aspi01Gene04421.t2 Aspi01Gene04421 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12159.t2 Aspi01Gene12159 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_30926 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_137710g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_768428g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g17436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00658 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo438753 No alias No description available 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR009719 GIP1_N 22 80
No external refs found!