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  5. LOC_Os05g48950.2

LOC_Os05g48950.2 (LOC_Os05g48950)


Aliases : LOC_Os05g48950

Description : no hits & (original description: none)


Gene families : OG0000617 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000617_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g48950.2
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
Aev_g19154 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20910 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G096900.1 Ceric.03G096900 not classified & original description: pacid=50572979... 0.02 OrthoFinder output from all 47 species
Mp8g02230.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Nbi_g22308 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g02038 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g10105 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g25687 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c5_6170V3.1 Pp3c5_6170 S-adenosyl-L-methionine-dependent methyltransferases... 0.01 OrthoFinder output from all 47 species
Spa_g15250 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e032429_P001 Zm00001e032429 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR019410 Methyltransf_16 17 186
No external refs found!