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  5. LOC_Os05g48670.1

LOC_Os05g48670.1 (AtTLP7, TLP7, LOC_Os05g48670)


Aliases : AtTLP7, TLP7, LOC_Os05g48670

Description : transcription factor (TUB)


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g48670.1
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00040910 TLP10, AtTLP10,... RNA biosynthesis.transcriptional activation.TUB... 0.04 OrthoFinder output from all 47 species
AMTR_s00057p00153680 AtTLP3, TLP3,... RNA biosynthesis.transcriptional activation.TUB... 0.03 OrthoFinder output from all 47 species
AMTR_s00130p00115490 AtTLP7, TLP7,... RNA biosynthesis.transcriptional activation.TUB... 0.03 OrthoFinder output from all 47 species
AT2G18280 TLP2, AtTLP2 tubby like protein 2 0.06 OrthoFinder output from all 47 species
AT3G06380 TLP9, ATTLP9 tubby-like protein 9 0.03 OrthoFinder output from all 47 species
Adi_g016061 TLP2, AtTLP2 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01968 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13904 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26939.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31258.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15697 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020603.38 AtTLP5, TLP5 RNA biosynthesis.transcriptional activation.TUB... 0.01 OrthoFinder output from all 47 species
Cre03.g155450 TLP2, AtTLP2 RNA biosynthesis.transcriptional activation.TUB... 0.02 OrthoFinder output from all 47 species
Dac_g08196 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g20422 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05701 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06633 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09092 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010999001 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.04 OrthoFinder output from all 47 species
GSVIVT01014191001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.03 OrthoFinder output from all 47 species
GSVIVT01029701001 TLP10, AtTLP10 RNA biosynthesis.transcriptional activation.TUB... 0.05 OrthoFinder output from all 47 species
GSVIVT01034528001 AtTLP1, TLP1 RNA biosynthesis.transcriptional activation.TUB... 0.04 OrthoFinder output from all 47 species
Gb_28725 TLP10, AtTLP10 transcription factor (TUB) 0.04 OrthoFinder output from all 47 species
Gb_35372 AtTLP7, TLP7 transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g64700.2 TLP10, AtTLP10,... transcription factor (TUB) 0.06 OrthoFinder output from all 47 species
Len_g01171 TLP10, AtTLP10 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g27792 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g12641 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15089 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27494 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g28688 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31683 AtTLP1, TLP1 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04396 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18593 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14941 No alias TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g19118 No alias TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Smo85745 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.03 OrthoFinder output from all 47 species
Solyc01g104670.3.1 TLP10, AtTLP10,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Solyc02g085130.4.1 TLP2, AtTLP2,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Zm00001e019166_P001 TLP10, AtTLP10,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Zm00001e024653_P002 AtTLP1, TLP1,... transcription factor (TUB) 0.05 OrthoFinder output from all 47 species
Zm00001e028052_P001 AtTLP7, TLP7,... transcription factor (TUB) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000007 Tubby_C 135 393
No external refs found!