LOC_Os05g48200.1 (GLT1, LOC_Os05g48200)

Aliases : GLT1, LOC_Os05g48200

Description : NADH-dependent glutamate synthase

Gene families : OG0000707 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000707_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g48200.1
Cluster	HCCA: Cluster_108

Target	Alias	Description	ECC score	Gene Family Method
Adi_g079981	GLT1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g29310	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.02	OrthoFinder output from all 47 species
Aop_g19020	GLT1	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene16184.t1	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.02	OrthoFinder output from all 47 species
Azfi_s0048.g030424	GLT1	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.05	OrthoFinder output from all 47 species
Ceric.38G027700.1	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.02	OrthoFinder output from all 47 species
Dde_g10235	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.02	OrthoFinder output from all 47 species
Gb_33763	GLT1	Glutamate synthase 1 [NADH], chloroplastic...	0.02	OrthoFinder output from all 47 species
Ore_g28872	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.02	OrthoFinder output from all 47 species
Pir_g30056	GLT1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0231.g026431	GLU1, FD-GOGAT,...	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.03	OrthoFinder output from all 47 species
Sam_g08968	No alias	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.02	OrthoFinder output from all 47 species
Sam_g39577	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g09158	GLT1	EC_1.4 oxidoreductase acTing on CH-NH2 group of donor &...	0.03	OrthoFinder output from all 47 species
Zm00001e030809_P001	GLT1, Zm00001e030809	Glutamate synthase 1 [NADH], chloroplastic OS=Oryza...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006536	glutamate metabolic process	None	Extended
BP	GO:0006537	glutamate biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009064	glutamine family amino acid metabolic process	None	Extended
BP	GO:0009084	glutamine family amino acid biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015930	glutamate synthase activity	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	Interproscan
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043648	dicarboxylic acid metabolic process	None	Extended
BP	GO:0043650	dicarboxylic acid biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002932	Glu_synthdom	938	1305
IPR028261	DPD_II	1701	1812
IPR002489	Glu_synth_asu_C	1388	1574
IPR017932	GATase_2_dom	107	534
IPR006982	Glu_synth_centr_N	582	868
IPR023753	FAD/NAD-binding_dom	1825	2150

External Links

No external refs found!

LOC_Os05g48200.1 (GLT1, LOC_Os05g48200)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation