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  5. LOC_Os05g47550.1

LOC_Os05g47550.1 (LOC_Os05g47550)


Aliases : LOC_Os05g47550

Description : ECA1/2 clathrin coated vesicle adaptor protein


Gene families : OG0000273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g47550.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g061156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010864001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Pir_g11731 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g007820.3.1 Solyc07g007820 Putative clathrin assembly protein At5g35200... 0.03 OrthoFinder output from all 47 species
Zm00001e026437_P001 Zm00001e026437 ECA1/2 clathrin coated vesicle adaptor protein 0.03 OrthoFinder output from all 47 species
Zm00001e031059_P001 Zm00001e031059 Putative clathrin assembly protein At5g35200... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
InterPro domains Description Start Stop
IPR011417 ANTH_dom 31 309
No external refs found!