LOC_Os05g45820.1 (LOC_Os05g45820)


Aliases : LOC_Os05g45820

Description : Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana (sp|q58fz0|nakr2_arath : 81.6)


Gene families : OG0000090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g45820.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00265500 HIPP22,... Heavy metal-associated isoprenylated plant protein 22... 0.06 OrthoFinder output from all 47 species
AMTR_s00005p00268350 evm_27.TU.AmTr_v1... Heavy metal-associated isoprenylated plant protein 37... 0.03 OrthoFinder output from all 47 species
AT1G71050 HIPP20 Heavy metal transport/detoxification superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G56240 CCH copper chaperone 0.04 OrthoFinder output from all 47 species
AT3G56891 No alias Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G08570 No alias Heavy metal transport/detoxification superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G35060 HIPP25 Heavy metal transport/detoxification superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g22151 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58091.t1 Aspi01Gene58091 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59197.t1 Aspi01Gene59197 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g04370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.10G055100.1 Ceric.10G055100 not classified & original description: pacid=50611673... 0.02 OrthoFinder output from all 47 species
Ceric.32G005700.1 Ceric.32G005700 not classified & original description: pacid=50598369... 0.02 OrthoFinder output from all 47 species
Dac_g14270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027966001 No alias Heavy metal-associated isoprenylated plant protein 36... 0.02 OrthoFinder output from all 47 species
GSVIVT01028973001 No alias Heavy metal-associated isoprenylated plant protein 31... 0.04 OrthoFinder output from all 47 species
GSVIVT01030883001 HIPP21 Heavy metal-associated isoprenylated plant protein 21... 0.05 OrthoFinder output from all 47 species
GSVIVT01031153001 No alias Heavy metal-associated isoprenylated plant protein 36... 0.05 OrthoFinder output from all 47 species
Gb_09038 HIPP20 Heavy metal-associated isoprenylated plant protein 20... 0.02 OrthoFinder output from all 47 species
Gb_16258 No alias Heavy metal-associated isoprenylated plant protein 37... 0.06 OrthoFinder output from all 47 species
Gb_20916 HIPP20 Heavy metal-associated isoprenylated plant protein 20... 0.02 OrthoFinder output from all 47 species
Gb_20921 No alias Heavy metal-associated isoprenylated plant protein 23... 0.02 OrthoFinder output from all 47 species
Gb_29259 No alias Heavy metal-associated isoprenylated plant protein 37... 0.03 OrthoFinder output from all 47 species
LOC_Os03g02860.1 LOC_Os03g02860 Heavy metal-associated isoprenylated plant protein 30... 0.04 OrthoFinder output from all 47 species
Len_g30584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_20279g0010 No alias Heavy metal-associated isoprenylated plant protein 23... 0.04 OrthoFinder output from all 47 species
Mp2g12480.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g09712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g37137 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15442 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g25089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0178.g024693 No alias not classified & original description: CDS=1-390 0.02 OrthoFinder output from all 47 species
Solyc01g105000.3.1 Solyc01g105000 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc02g076880.4.1 Solyc02g076880 Heavy metal-associated isoprenylated plant protein 28... 0.03 OrthoFinder output from all 47 species
Solyc02g091300.3.1 HIPP21, Solyc02g091300 Heavy metal-associated isoprenylated plant protein 20... 0.06 OrthoFinder output from all 47 species
Solyc04g072700.4.1 Solyc04g072700 Heavy metal-associated isoprenylated plant protein 24... 0.03 OrthoFinder output from all 47 species
Solyc06g050710.4.1 Solyc06g050710 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc12g006997.1.1 Solyc12g006997 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e003565_P001 Zm00001e003565 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e004204_P001 Zm00001e004204 Heavy metal-associated isoprenylated plant protein 23... 0.06 OrthoFinder output from all 47 species
Zm00001e006177_P001 NAKR1, Zm00001e006177 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e015864_P001 Zm00001e015864 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e019945_P001 Zm00001e019945 Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e022357_P001 Zm00001e022357 Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e027825_P001 Zm00001e027825 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e037128_P001 Zm00001e037128 Heavy metal-associated isoprenylated plant protein 28... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006121 HMA_dom 87 138
No external refs found!