LOC_Os05g45750.1 (LOC_Os05g45750)

Aliases : LOC_Os05g45750

Description : chaperone component ClpX of mitochondrion Clp-type protease complex

Gene families : OG0001706 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001706_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g45750.1

Target	Alias	Description	ECC score	Gene Family Method
Ala_g13608	CLPX	unfoldase component *(ClpX) of mitochondrion Clp-type...	0.02	OrthoFinder output from all 47 species
Azfi_s3966.g117405	No alias	not classified & original description: CDS=1-537	0.02	OrthoFinder output from all 47 species
Ceric.01G046900.1	CLPX, Ceric.01G046900	unfoldase component *(ClpX) of mitochondrion Clp-type...	0.03	OrthoFinder output from all 47 species
Ore_g09915	CLPX	unfoldase component *(ClpX) of mitochondrion Clp-type...	0.02	OrthoFinder output from all 47 species
Zm00001e014856_P002	Zm00001e014856	chaperone component ClpX of mitochondrion Clp-type...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
BP	GO:0003352	regulation of cilium movement	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0032886	regulation of microtubule-based process	IEP	HCCA
BP	GO:0060632	regulation of microtubule-based movement	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019489	Clp_ATPase_C	320	391
IPR003959	ATPase_AAA_core	109	313

External Links

No external refs found!