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  5. LOC_Os05g44550.1

LOC_Os05g44550.1 (LOC_Os05g44550)


Aliases : LOC_Os05g44550

Description : no description available(sp|q6dbh0|apd2_arath : 110.0)


Gene families : OG0001688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001688_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g44550.1

Target Alias Description ECC score Gene Family Method Actions
AT2G38195 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g03929 No alias regulatory E3 ubiquitin ligase (APD) involved in... 0.02 OrthoFinder output from all 47 species
Aspi01Gene33658.t1 Aspi01Gene33658 regulatory E3 ubiquitin ligase (APD) involved in... 0.04 OrthoFinder output from all 47 species
Dac_g01587 No alias regulatory E3 ubiquitin ligase (APD) involved in... 0.03 OrthoFinder output from all 47 species
MA_10432900g0010 No alias no description available(sp|q6dbh0|apd2_arath : 91.7) 0.02 OrthoFinder output from all 47 species
MA_66746g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g47372 No alias regulatory E3 ubiquitin ligase (APD) involved in... 0.02 OrthoFinder output from all 47 species
Pir_g29913 No alias regulatory E3 ubiquitin ligase (APD) involved in... 0.03 OrthoFinder output from all 47 species
Pnu_g10307 No alias regulatory E3 ubiquitin ligase (APD) involved in... 0.03 OrthoFinder output from all 47 species
Sam_g29523 No alias regulatory E3 ubiquitin ligase (APD) involved in... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR032008 APD1-4_N 66 137
No external refs found!