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  5. LOC_Os02g15810.1

LOC_Os02g15810.1


Description : High mobility group B protein 13 OS=Arabidopsis thaliana (sp|q9t012|hmg13_arath : 223.0)


Gene families : OG_01_0002362 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002362_tree ,
OG_02_0006706 (LandPlants) Phylogenetic Tree(s): OG_02_0006706_tree ,
OG_03_0006137 (SeedPlants) Phylogenetic Tree(s): OG_03_0006137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g15810.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00093p00057150 evm_27.TU.AmTr_v1... High mobility group B protein 6 OS=Arabidopsis thaliana 0.26 Archaeplastida
AT4G11080 No alias HMG (high mobility group) box protein 0.11 Archaeplastida
AT4G23800 No alias HMG (high mobility group) box protein 0.23 Archaeplastida
Cre16.g672300 No alias No description available 0.01 Archaeplastida
GSVIVT01019504001 No alias High mobility group B protein 13 OS=Arabidopsis thaliana 0.29 Archaeplastida
Gb_00374 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.08 Archaeplastida
MA_783123g0010 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.13 Archaeplastida
Mp2g12330.1 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.14 Archaeplastida
Pp3c11_8530V3.1 No alias HMG (high mobility group) box protein 0.1 Archaeplastida
Pp3c7_20570V3.1 No alias HMG (high mobility group) box protein 0.05 Archaeplastida
Smo73858 No alias High mobility group B protein 6 OS=Arabidopsis thaliana 0.06 Archaeplastida
Solyc08g082070.3.1 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.16 Archaeplastida
Zm00001e014266_P001 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.28 Archaeplastida
AMTR_s00093p00057150 evm_27.TU.AmTr_v1... High mobility group B protein 6 OS=Arabidopsis thaliana 0.28 LandPlants
AT4G11080 No alias HMG (high mobility group) box protein 0.09 LandPlants
AT4G23800 No alias HMG (high mobility group) box protein 0.25 LandPlants
GSVIVT01019504001 No alias High mobility group B protein 13 OS=Arabidopsis thaliana 0.29 LandPlants
Gb_00374 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.09 LandPlants
MA_783123g0010 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.13 LandPlants
Mp2g12330.1 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.12 LandPlants
Pp3c11_8530V3.1 No alias HMG (high mobility group) box protein 0.1 LandPlants
Pp3c7_20570V3.1 No alias HMG (high mobility group) box protein 0.03 LandPlants
Smo73858 No alias High mobility group B protein 6 OS=Arabidopsis thaliana 0.05 LandPlants
Solyc08g082070.3.1 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.15 LandPlants
Zm00001e014266_P001 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.27 LandPlants
AMTR_s00093p00057150 evm_27.TU.AmTr_v1... High mobility group B protein 6 OS=Arabidopsis thaliana 0.29 SeedPlants
AT4G11080 No alias HMG (high mobility group) box protein 0.09 SeedPlants
AT4G23800 No alias HMG (high mobility group) box protein 0.25 SeedPlants
GSVIVT01019504001 No alias High mobility group B protein 13 OS=Arabidopsis thaliana 0.29 SeedPlants
Gb_00374 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.09 SeedPlants
MA_783123g0010 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.11 SeedPlants
Solyc08g082070.3.1 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.15 SeedPlants
Zm00001e014266_P001 No alias High mobility group B protein 6 OS=Arabidopsis thaliana... 0.27 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 285 351
IPR009071 HMG_box_dom 158 219
IPR009071 HMG_box_dom 414 481
No external refs found!