1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g43040.1

LOC_Os05g43040.1 (LOC_Os05g43040)


Aliases : LOC_Os05g43040

Description : Protein SULFUR DEFICIENCY-INDUCED 2 OS=Arabidopsis thaliana (sp|q8l730|sdi2_arath : 355.0)


Gene families : OG0001526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001526_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g43040.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AT1G04770 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G51280 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G48850 ATSDI1 Tetratricopeptide repeat (TPR)-like superfamily protein 0.09 OrthoFinder output from all 47 species
Adi_g045576 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g108643 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.28G044100.1 Ceric.28G044100 not classified & original description: pacid=50570452... 0.07 OrthoFinder output from all 47 species
GSVIVT01011343001 No alias Cell cycle.mitosis and meiosis.meiotic... 0.04 OrthoFinder output from all 47 species
GSVIVT01018742001 No alias Cell cycle.mitosis and meiosis.meiotic... 0.02 OrthoFinder output from all 47 species
GSVIVT01018744001 No alias Cell cycle.mitosis and meiosis.meiotic... 0.02 OrthoFinder output from all 47 species
GSVIVT01028569001 ATSDI1 Cell cycle.mitosis and meiosis.meiotic... 0.04 OrthoFinder output from all 47 species
Gb_30001 No alias Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_38948 ATSDI1 Protein SULFUR DEFICIENCY-INDUCED 1 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
MA_10425911g0010 No alias Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_10429050g0010 No alias Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_3682g0010 No alias Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_8881560g0010 No alias Protein POLLENLESS 3-LIKE 2 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018882 No alias not classified & original description: CDS=158-1273 0.02 OrthoFinder output from all 47 species
Sam_g07258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g007970.3.1 ATSDI1, Solyc06g007970 Protein SULFUR DEFICIENCY-INDUCED 1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc09g061700.3.1 ATSDI1, Solyc09g061700 Protein SULFUR DEFICIENCY-INDUCED 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc09g091600.4.1 Solyc09g091600 Protein SULFUR DEFICIENCY-INDUCED 2 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Zm00001e010252_P001 Zm00001e010252 meiotic exit regulator (MS5/TDM1) 0.02 OrthoFinder output from all 47 species
Zm00001e032076_P001 ATSDI1, Zm00001e032076 Protein SULFUR DEFICIENCY-INDUCED 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e035992_P002 Zm00001e035992 meiotic exit regulator (MS5/TDM1) 0.02 OrthoFinder output from all 47 species
Zm00001e039019_P001 ATSDI1, Zm00001e039019 Protein SULFUR DEFICIENCY-INDUCED 1 OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR019734 TPR_repeat 163 194
No external refs found!