LOC_Os05g42280.1 (LOC_Os05g42280)


Aliases : LOC_Os05g42280

Description : no hits & (original description: none)


Gene families : OG0007811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007811_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g42280.1

Target Alias Description ECC score Gene Family Method Actions
AT4G27390 No alias unknown protein; INVOLVED IN: biological_process... 0.04 OrthoFinder output from all 47 species
Ala_g20677 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08205 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g09684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25785.t1 Aspi01Gene25785 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06364 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g05387 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g00766 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g29744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g32938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e027374_P001 Zm00001e027374 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!