LOC_Os08g33700 (Os08g0434000)


Aliases : Os08g0434000

Description : No description available


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os08g33700

Target Alias Description ECC score Gene Family Method Actions
AT1G06140 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT1G17630 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.05 Gene family
AT1G20230 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT3G03580 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
AT3G08820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT3G15930 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT3G26782 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT3G53360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT4G13650 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT4G15720 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT4G35130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT4G39530 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT5G27110 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
GSVIVT01003422001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01007645001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01010031001 No alias No description available 0.05 Gene family
GSVIVT01017880001 No alias No description available 0.03 Gene family
GSVIVT01020758001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01024588001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01030054001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01033304001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01033837001 No alias No description available 0.02 Gene family
GSVIVT01036788001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_10429043g0020 No alias No description available 0.02 Gene family
MA_107356g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_210823g0010 No alias No description available 0.03 Gene family
MA_252238g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_2991g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_3317g0020 No alias No description available 0.02 Gene family
MA_34492g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_56714g0010 No alias No description available 0.03 Gene family
MA_59148g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
MA_65500g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_683665g0010 No alias No description available 0.02 Gene family
MA_81436g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_97789g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc01g010510.3.1 Solyc01g010510.3 No description available 0.04 Gene family
Solyc01g080190.3.1 Solyc01g080190.3 No description available 0.03 Gene family
Solyc01g091610.1.1 Solyc01g091610.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc01g100800.2.1 Solyc01g100800.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc02g093380.1.1 Solyc02g093380.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc03g007840.1.1 Solyc03g007840.1 35.1.27 not assigned.no ontology.tetratricopeptide... 0.04 Gene family
Solyc03g116000.1.1 Solyc03g116000.1 No description available 0.05 Gene family
Solyc04g063300.2.1 Solyc04g063300.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc04g064750.2.1 Solyc04g064750.2 No description available 0.03 Gene family
Solyc04g076330.2.1 Solyc04g076330.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc05g012630.1.1 Solyc05g012630.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc06g062610.2.1 Solyc06g062610.2 No description available 0.02 Gene family
Solyc06g082880.2.1 Solyc06g082880.2 No description available 0.03 Gene family
Solyc07g055310.1.1 Solyc07g055310.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc08g078570.2.1 Solyc08g078570.2 No description available 0.06 Gene family
Solyc09g007040.1.1 Solyc09g007040.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc09g009950.3.1 Solyc09g009950.3 No description available 0.03 Gene family
Solyc09g010070.1.1 Solyc09g010070.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc11g010220.2.1 Solyc11g010220.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d003047 GRMZM2G077420 No description available 0.03 Gene family
Zm00001d003050 GRMZM2G331779 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d005149 GRMZM2G138303 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Zm00001d013941 GRMZM2G073017 No description available 0.07 Gene family
Zm00001d017518 GRMZM2G014977 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Zm00001d022224 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d023331 GRMZM2G304965 No description available 0.02 Gene family
Zm00001d025870 GRMZM5G827485 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Zm00001d030143 GRMZM2G430710 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d037254 GRMZM2G060337 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d037891 No alias No description available 0.04 Gene family
Zm00001d040222 GRMZM2G411786 No description available 0.04 Gene family
Zm00001d042067 GRMZM2G099875 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d043081 GRMZM2G350410 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Zm00001d044547 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d050938 GRMZM2G163396 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Zm00001d051816 GRMZM2G029859 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032867 DYW_dom 467 591
IPR002885 Pentatricopeptide_repeat 267 290
IPR002885 Pentatricopeptide_repeat 164 187
IPR002885 Pentatricopeptide_repeat 190 238
IPR002885 Pentatricopeptide_repeat 292 340
No external refs found!