LOC_Os05g41030.1 (LOC_Os05g41030)


Aliases : LOC_Os05g41030

Description : xylogen-type arabinogalactan protein


Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g41030.1

Target Alias Description ECC score Gene Family Method Actions
Als_g45300 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0144.g051640 No alias not classified & original description: CDS=180-788 0.02 OrthoFinder output from all 47 species
Ceric.01G082200.1 Ceric.01G082200 not classified & original description: pacid=50591603... 0.04 OrthoFinder output from all 47 species
Dac_g08117 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g09538 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g31013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56929 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_1925g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9903145g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g07639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17108 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12691 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g19919 No alias arabinogalactan protein *(Xylogen) & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g11193 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s2896.g028490 No alias not classified & original description: CDS=1-624 0.02 OrthoFinder output from all 47 species
Solyc08g007460.3.1 Solyc08g007460 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g22068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 28 131
No external refs found!