LOC_Os05g39880.1 (LOC_Os05g39880)


Aliases : LOC_Os05g39880

Description : EPF/EPFL precursor polypeptide


Gene families : OG0000344 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000344_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g39880.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00234600 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.04 OrthoFinder output from all 47 species
AT1G80133 No alias unknown protein; LOCATED IN: endomembrane system; Has... 0.04 OrthoFinder output from all 47 species
AT3G22820 No alias allergen-related 0.03 OrthoFinder output from all 47 species
AT4G14723 No alias BEST Arabidopsis thaliana protein match is:... 0.04 OrthoFinder output from all 47 species
AT5G10310 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 OrthoFinder output from all 47 species
Aev_g16584 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02875 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47557 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19217 No alias EPF/EPFL precursor polypeptide & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g01444 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20591 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g59196 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19202.t1 Aspi01Gene19202 EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24913.t1 Aspi01Gene24913 EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36510.t1 Aspi01Gene36510 EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53522.t1 EPFL6, CHAL,... EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70394.t1 Aspi01Gene70394 EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010386 No alias EPF/EPFL precursor polypeptide & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0060.g034792 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0084.g038996 No alias EPF/EPFL precursor polypeptide & original description: CDS=42-764 0.04 OrthoFinder output from all 47 species
Cba_g02257 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.37G062100.1 EPFL6, CHAL,... EPF/EPFL precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g02616 No alias EPF/EPFL precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g10192 No alias EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23792 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g03647 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g31556 No alias EPF/EPFL precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g48614 No alias EPF/EPFL precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g47268 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00320 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17400 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015177001 No alias Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
GSVIVT01018037001 No alias Phytohormones.signalling peptides.CRP... 0.05 OrthoFinder output from all 47 species
Gb_05485 EPFL6, CHAL EPF/EPFL precursor polypeptide 0.02 OrthoFinder output from all 47 species
Gb_22501 EPFL6, CHAL EPF/EPFL precursor polypeptide 0.03 OrthoFinder output from all 47 species
Gb_39245 No alias EPF/EPFL precursor polypeptide 0.02 OrthoFinder output from all 47 species
Len_g17309 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g13277 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
MA_103538g0010 No alias EPF/EPFL precursor polypeptide 0.02 OrthoFinder output from all 47 species
MA_184852g0010 No alias EPF/EPFL precursor polypeptide 0.03 OrthoFinder output from all 47 species
Msp_g06862 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g29167 No alias EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29330 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39321 No alias EPF/EPFL precursor polypeptide & original description: none 0.01 OrthoFinder output from all 47 species
Pp3c5_11260V3.1 Pp3c5_11260 allergen-related 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002848 No alias EPF/EPFL precursor polypeptide & original description: CDS=1-825 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017031 No alias EPF/EPFL precursor polypeptide & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022012 No alias EPF/EPFL precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0183.g024912 No alias EPF/EPFL precursor polypeptide & original description:... 0.07 OrthoFinder output from all 47 species
Solyc07g008205.1.1 Solyc07g008205 EPF/EPFL precursor polypeptide 0.03 OrthoFinder output from all 47 species
Spa_g04520 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28500 No alias EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31324 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50560 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51023 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!