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Aliases : PRA1.B2, LOC_Os05g39670
Description : B-G-class Rab-GDF protein
Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os05g39670.1 | |
| Cluster | HCCA: Cluster_75 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G55640 | PRA1.G1 | prenylated RAB acceptor 1.G1 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g022346 | PRA1.B6 | B-G-class Rab-GDF protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g00881 | PRA1.B1 | B-G-class Rab-GDF protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g17771 | PRA1.B5 | B-G-class Rab-GDF protein & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g15726 | PRA1.B5 | B-G-class Rab-GDF protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19746 | PRA1.B2 | B-G-class Rab-GDF protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g10702 | PRA7, PRA1.F2 | B-G-class Rab-GDF protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_00593 | No alias | B-G-class Rab-GDF protein | 0.02 | OrthoFinder output from all 47 species | |
| Len_g13013 | PRA1.B4 | B-G-class Rab-GDF protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g21253 | PRA1.B5 | B-G-class Rab-GDF protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10426038g0020 | PRA1.B3 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g23710.1 | PRA1.B4 | B-G-class Rab-GDF protein | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g10850 | PRA1.B3 | B-G-class Rab-GDF protein & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g39132 | PRA1.B5 | B-G-class Rab-GDF protein & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| MF | GO:0015035 | protein-disulfide reductase activity | IEP | HCCA |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| CC | GO:0018995 | host cellular component | IEP | HCCA |
| CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
| CC | GO:0033643 | host cell part | IEP | HCCA |
| CC | GO:0033646 | host intracellular part | IEP | HCCA |
| CC | GO:0033647 | host intracellular organelle | IEP | HCCA |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | HCCA |
| CC | GO:0042025 | host cell nucleus | IEP | HCCA |
| CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004895 | Prenylated_rab_accept_PRA1 | 54 | 196 |
| No external refs found! |