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  5. LOC_Os05g38820.4

LOC_Os05g38820.4 (NF-YB3, LOC_Os05g38820)


Aliases : NF-YB3, LOC_Os05g38820

Description : component NF-YB of NF-Y transcription factor complex


Gene families : OG0000364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g38820.4

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0003.g007945 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Ceric.39G026100.1 NF-YB3, Ceric.39G026100 component *(NF-YB) of NF-Y transcription factor complex... 0.04 OrthoFinder output from all 47 species
MA_96911g0010 NF-YB3 component NF-YB of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Ore_g22868 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.04 OrthoFinder output from all 47 species
Ppi_g04264 NF-YB3 component *(NF-YB) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Solyc04g009520.3.1 NF-YB8, Solyc04g009520 component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Solyc04g049910.4.1 NF-YB10, Solyc04g049910 component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Zm00001e027268_P001 NF-YB10, Zm00001e027268 component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
Zm00001e035517_P001 NF-YB3, Zm00001e035517 component NF-YB of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 42 106
No external refs found!