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  5. LOC_Os05g36920.1

LOC_Os05g36920.1 (ATHDA8, HDA8, HDA08,...)


Aliases : ATHDA8, HDA8, HDA08, LOC_Os05g36920

Description : class-II histone deacetylase


Gene families : OG0007602 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007602_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g36920.1

Target Alias Description ECC score Gene Family Method Actions
Lfl_g30484 ATHDA8, HDA8, HDA08 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990316 Atg1/ULK1 kinase complex IEP HCCA
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 213 503
No external refs found!