LOC_Os05g36350.1 (MEF21, LOC_Os05g36350)


Aliases : MEF21, LOC_Os05g36350

Description : RNA editing factor (MEF21)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g36350.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g002777 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003753 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004499 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005661 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g012996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018129 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018615 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034945 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g053630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066950 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11539 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g27636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44172.t1 Aspi01Gene44172 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45888 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g18257 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16808 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36065 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g23651 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000420001 MEF22 RNA processing.organelle machineries.RNA... 0.05 OrthoFinder output from all 47 species
GSVIVT01010125001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01026881001 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
GSVIVT01029347001 No alias Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
GSVIVT01030443001 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.04 OrthoFinder output from all 47 species
Len_g18490 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06599 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19289 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37727 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24060 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33384 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13456 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07449 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29054 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g44900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53962 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60968 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g065030.1.1 EMB2758, Solyc02g065030 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Solyc03g116000.1.1 Solyc03g116000 Pentatricopeptide repeat-containing protein At3g47530... 0.03 OrthoFinder output from all 47 species
Solyc04g063300.3.1 Solyc04g063300 Pentatricopeptide repeat-containing protein At3g26540... 0.04 OrthoFinder output from all 47 species
Solyc04g074160.3.1 Solyc04g074160 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc06g009500.1.1 Solyc06g009500 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Solyc07g042760.1.1 Solyc07g042760 Pentatricopeptide repeat-containing protein At4g31070,... 0.03 OrthoFinder output from all 47 species
Solyc09g090440.1.1 LPA66, Solyc09g090440 Pentatricopeptide repeat-containing protein At5g66520... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 315 363
IPR002885 Pentatricopeptide_repeat 215 262
IPR002885 Pentatricopeptide_repeat 391 415
IPR002885 Pentatricopeptide_repeat 186 214
IPR002885 Pentatricopeptide_repeat 81 106
IPR002885 Pentatricopeptide_repeat 158 184
No external refs found!