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  5. LOC_Os05g35690.1

LOC_Os05g35690.1 (LOC_Os05g35690)


Aliases : LOC_Os05g35690

Description : GASA precursor polypeptide


Gene families : OG0000541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000541_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g35690.1
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00273070 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
AMTR_s00041p00230770 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.05 OrthoFinder output from all 47 species
AMTR_s00052p00079580 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
AMTR_s00053p00132370 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
Aev_g36519 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39883 GASA2 GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30733 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33463.t1 Aspi01Gene33463 GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0030.g024387 No alias GASA precursor polypeptide & original description: CDS=233-526 0.05 OrthoFinder output from all 47 species
Cba_g03520 GASA3 GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07912 GASA3 GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G011200.1 GASA3, Ceric.07G011200 GASA precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g04301 GASA2 GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g41660 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g38551 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14897 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Gb_12909 No alias GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
Gb_16670 No alias GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
Gb_25904 No alias GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
Len_g04492 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Len_g45849 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
MA_10142784g0010 No alias GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
MA_132217g0010 No alias GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
MA_24001g0010 No alias GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
MA_469246g0010 No alias GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
MA_717315g0010 GASA2 GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
MA_9084305g0010 GASA2 GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
Msp_g17862 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27903 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g24863 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61575 GASA3 GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015335 No alias GASA precursor polypeptide & original description: CDS=1460-1924 0.02 OrthoFinder output from all 47 species
Solyc06g007910.4.1 GASA4, Solyc06g007910 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
Solyc08g005620.3.1 Solyc08g005620 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
Solyc11g011210.2.1 GASA5, Solyc11g011210 GASA precursor polypeptide 0.02 OrthoFinder output from all 47 species
Solyc12g042500.2.1 Solyc12g042500 GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
Spa_g28986 GASA3 GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41277 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004992_P001 Zm00001e004992 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR003854 GASA 33 92
No external refs found!