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  5. LOC_Os05g35320.1

LOC_Os05g35320.1 (ATPB, PB, LOC_Os05g35320)


Aliases : ATPB, PB, LOC_Os05g35320

Description : ATP synthase subunit beta, chloroplastic OS=Oryza sativa subsp. japonica (sp|p12085|atpb_orysj : 685.0)


Gene families : OG0000973 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000973_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g35320.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272630 ATPB, PB,... ATP synthase subunit beta, chloroplastic OS=Amborella trichopoda 0.03 OrthoFinder output from all 47 species
AMTR_s00606p00000120 ATPB, PB,... ATP synthase subunit beta, chloroplastic OS=Amborella trichopoda 0.11 OrthoFinder output from all 47 species
ATCG00480 ATPB, PB ATP synthase subunit beta 0.11 OrthoFinder output from all 47 species
Aev_g10806 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.17 OrthoFinder output from all 47 species
Als_g08694 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.04 OrthoFinder output from all 47 species
Aob_g06682 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.14 OrthoFinder output from all 47 species
Ceric.02G014100.1 ATPB, PB, Ceric.02G014100 not classified & original description: pacid=50586216... 0.12 OrthoFinder output from all 47 species
Ceric.03G022700.1 ATPB, PB, Ceric.03G022700 subunit beta of peripheral CF1 subcomplex of ATP... 0.09 OrthoFinder output from all 47 species
Ceric.09G048700.1 ATPB, PB, Ceric.09G048700 subunit beta of peripheral CF1 subcomplex of ATP... 0.1 OrthoFinder output from all 47 species
Ceric.1Z141700.1 ATPB, PB, Ceric.1Z141700 subunit beta of peripheral CF1 subcomplex of ATP... 0.1 OrthoFinder output from all 47 species
Ceric.1Z162000.1 ATPB, PB, Ceric.1Z162000 not classified & original description: pacid=50596930... 0.07 OrthoFinder output from all 47 species
Ceric.32G035500.1 ATPB, PB, Ceric.32G035500 not classified & original description: pacid=50597326... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001376.3 No alias ATP synthase subunit beta, mitochondrial... 0.01 OrthoFinder output from all 47 species
Cre17.g698000 No alias Cellular respiration.oxidative phosphorylation.ATP... 0.01 OrthoFinder output from all 47 species
Dcu_g20874 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.13 OrthoFinder output from all 47 species
GSVIVT01006210001 ATPB, PB ATP synthase subunit beta, chloroplastic OS=Vitis vinifera 0.08 OrthoFinder output from all 47 species
Gb_00175 ATPB, PB ATP synthase subunit beta, chloroplastic OS=Picea abies... 0.1 OrthoFinder output from all 47 species
Gb_11358 ATPB, PB subunit epsilon of peripheral CF1 subcomplex of ATP... 0.11 OrthoFinder output from all 47 species
Gb_18610 ATPB, PB no description available(sp|q31794|atpb_antag : 424.0) 0.03 OrthoFinder output from all 47 species
Gb_22349 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.1 OrthoFinder output from all 47 species
LOC_Os06g39740.1 ATPB, PB, LOC_Os06g39740 subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.21 OrthoFinder output from all 47 species
Lfl_g05507 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.14 OrthoFinder output from all 47 species
Nbi_g01140 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.05 OrthoFinder output from all 47 species
Ore_g00399 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.12 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010854 ATPB, PB not classified & original description: CDS=1-264 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0228.g026385 ATPB, PB not classified & original description: CDS=1-342 0.07 OrthoFinder output from all 47 species
Sam_g02504 No alias subunit beta of peripheral CF1 subcomplex of ATP... 0.11 OrthoFinder output from all 47 species
Smo236855 ATPB, PB ATP synthase subunit beta, chloroplastic OS=Psilotum nudum 0.17 OrthoFinder output from all 47 species
Solyc00g500064.1.1 ATPB, PB, Solyc00g500064 subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.05 OrthoFinder output from all 47 species
Solyc04g039850.1.1 ATPB, PB, Solyc04g039850 ATP synthase subunit beta, chloroplastic OS=Agapanthus... 0.04 OrthoFinder output from all 47 species
Solyc07g021180.3.1 ATPB, PB, Solyc07g021180 ATP synthase subunit beta, chloroplastic OS=Nicotiana... 0.11 OrthoFinder output from all 47 species
Spa_g51445 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.14 OrthoFinder output from all 47 species
Zm00001e042082_P001 ATPB, PB, Zm00001e042082 ATP synthase subunit beta, chloroplastic OS=Zea mays... 0.21 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000194 ATPase_F1/V1/A1_a/bsu_nucl-bd 74 294
No external refs found!