LOC_Os08g33050 (Os08g0426866)


Aliases : Os08g0426866

Description : 27.3.20 RNA.regulation of transcription.G2-like transcription factor family, GARP Encodes a KANADI protein (KAN) that regulates organ polarity in Arabidopsis. KAN is required for abaxial identity in both leaves and carpels, and encodes a nuclear-localized protein in the GARP family of putative transcription factors. Together with KAN2, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN2 and KAN4, KAN1 appears to be required for proper regulation of PIN1 in early embryogenesis.


Gene families : OG_01_0000018 (Gene family) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os08g33050
Cluster HCCA cluster: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AT4G04580 No alias Homeodomain-like superfamily protein 0.02 Gene family
GSVIVT01009589001 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
GSVIVT01026319001 No alias No description available 0.04 Gene family
LOC_Os08g33750 Os08g0434700 No description available 0.03 Gene family
LOC_Os11g01480 Os11g0106100 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
LOC_Os12g01490 Os12g0105600 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
MA_181986g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
MA_52379g0010 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
Smo423505 PACid_15422212 27.3.20 RNA.regulation of transcription.G2-like... 0.01 Gene family
Smo423935 PACid_15403043 27.3.20 RNA.regulation of transcription.G2-like... 0.01 Gene family
Smo438638 PACid_15422621 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
Solyc05g055940.3.1 Solyc05g055940.3 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc06g051060.3.1 Solyc06g051060.3 27.3.20 RNA.regulation of transcription.G2-like... 0.05 Gene family
Zm00001d032249 GRMZM2G056400 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!