LOC_Os05g34900.1 (LOC_Os05g34900)

Aliases : LOC_Os05g34900

Description : Ubinuclein-1 OS=Arabidopsis thaliana (sp|q8rx78|ubn1_arath : 262.0)

Gene families : OG0002157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002157_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g34900.1
Cluster	HCCA: Cluster_105

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00017p00245850	evm_27.TU.AmTr_v1...	Ubinuclein-1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Len_g22616	No alias	component *(UBN) of HIRA chaperone complex & original...	0.03	OrthoFinder output from all 47 species
Ore_g44164	No alias	component *(UBN) of HIRA chaperone complex & original...	0.02	OrthoFinder output from all 47 species
Ore_g44860	No alias	component *(UBN) of HIRA chaperone complex & original...	0.03	OrthoFinder output from all 47 species
Sam_g27050	No alias	component *(UBN) of HIRA chaperone complex & original...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR014840	HRD	141	189

External Links

No external refs found!