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  5. LOC_Os05g33440.1

LOC_Os05g33440.1 (LOC_Os05g33440)


Aliases : LOC_Os05g33440

Description : transcription factor (mTERF)


Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g33440.1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00116710 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00117910 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.05 OrthoFinder output from all 47 species
AMTR_s00010p00224530 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00230750 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00237160 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00239860 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AMTR_s00038p00175390 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AMTR_s00060p00059830 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.05 OrthoFinder output from all 47 species
AMTR_s00066p00157220 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AMTR_s00084p00087230 PTAC15,... RNA biosynthesis.organelle... 0.02 OrthoFinder output from all 47 species
AMTR_s00126p00036100 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 OrthoFinder output from all 47 species
AMTR_s01360p00009540 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 OrthoFinder output from all 47 species
AT1G21150 No alias Mitochondrial transcription termination factor family protein 0.03 OrthoFinder output from all 47 species
AT1G62110 No alias Mitochondrial transcription termination factor family protein 0.03 OrthoFinder output from all 47 species
AT3G46950 No alias Mitochondrial transcription termination factor family protein 0.04 OrthoFinder output from all 47 species
AT5G23930 No alias Mitochondrial transcription termination factor family protein 0.02 OrthoFinder output from all 47 species
Adi_g110583 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04588 No alias mTERF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g28698 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07281 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18494 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22741 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17726 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g28360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64007.t1 Aspi01Gene64007 mTERF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene67837.t1 Aspi01Gene67837 mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0045.g030001 EMB93, SOLDAT10 mTERF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g06519 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12846 No alias mTERF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g14738 No alias mTERF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g36413 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G015700.1 Ceric.30G015700 mTERF-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g10960 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g18393 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g31748 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02967 No alias mTERF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g09151 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11284 PTAC15 mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g22736 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g24025 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48743 PTAC15 mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10365 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10992 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07610 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13389 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17694 PTAC15 mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.02 OrthoFinder output from all 47 species
GSVIVT01028380001 No alias RNA biosynthesis.organelle... 0.04 OrthoFinder output from all 47 species
Gb_07257 PTAC15 TAC15 cofactor of plastid-encoded RNA polymerase.... 0.03 OrthoFinder output from all 47 species
Gb_14091 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Gb_15878 No alias transcription factor (mTERF) 0.05 OrthoFinder output from all 47 species
Gb_26176 No alias transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species
Gb_35262 No alias transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
Len_g13324 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24851 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08103 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19011 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_192398g0010 No alias transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species
MA_28540g0010 No alias transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
MA_493420g0010 No alias transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
MA_57842g0010 No alias transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
MA_86824g0010 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
MA_92135g0010 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Msp_g15719 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47549 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17587 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26624 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35894 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g33567 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09613 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03790 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17760 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29276 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30682 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32507 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18975 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo403419 No alias RNA biosynthesis.organelle... 0.02 OrthoFinder output from all 47 species
Smo77318 EMB93, SOLDAT10 RNA biosynthesis.organelle... 0.02 OrthoFinder output from all 47 species
Solyc04g011700.2.1 Solyc04g011700 transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species
Solyc04g072500.1.1 Solyc04g072500 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
Solyc04g072540.3.1 Solyc04g072540 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
Spa_g04981 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19485 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24963 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e018154_P001 Zm00001e018154 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Zm00001e018894_P001 Zm00001e018894 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Zm00001e022322_P001 Zm00001e022322 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
Zm00001e027097_P001 Zm00001e027097 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Zm00001e031638_P001 Zm00001e031638 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR003690 MTERF 89 335
No external refs found!