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  5. LOC_Os05g32350.1

LOC_Os05g32350.1 (LOC_Os05g32350)


Aliases : LOC_Os05g32350

Description : no hits & (original description: none)


Gene families : OG0002729 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002729_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g32350.1
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Aev_g19718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10246 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01036912001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
Gb_12188 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10432314g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g07359 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g007200.4.1 Solyc07g007200 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g12222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023678_P001 Zm00001e023678 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 491 534
No external refs found!