LOC_Os05g32270.1 (LOC_Os05g32270)


Aliases : LOC_Os05g32270

Description : transcription factor (AP2)


Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g32270.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00216470 RAP2.7, TOE1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G51190 PLT2 Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G17430 BBM Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g069103 AP2, FLO2, FL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115175 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aev_g09099 RAP2.7, TOE1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07889 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ala_g27522 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Als_g15824 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene15519.t1 Aspi01Gene15519 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene36567.t1 Aspi01Gene36567 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene67586.t1 AP2, FLO2, FL1,... AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0059.g034553 AIL5, EMK, CHO1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0072.g037000 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0496.g073599 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Cba_g00568 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Cba_g06694 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Cba_g31057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G056200.1 PLT2, Ceric.10G056200 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Ceric.14G085600.1 Ceric.14G085600 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.26G003300.1 PLT2, Ceric.26G003300 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Cre16.g667900 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 OrthoFinder output from all 47 species
Dcu_g10360 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Dde_g03369 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01025307001 PLT2 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01025548001 RAP2.7, TOE1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01033273001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_18560 BBM transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Gb_24420 AIL5, EMK, CHO1 transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
LOC_Os11g03540.1 WRI1, ATWRI1,... transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Len_g18966 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.05 OrthoFinder output from all 47 species
Len_g38540 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Len_g41222 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
MA_67041g0010 No alias transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Nbi_g01472 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ore_g31493 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36760 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g25918 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Pp3c22_17870V3.1 Pp3c22_17870 target of early activation tagged (EAT) 2 0.01 OrthoFinder output from all 47 species
Ppi_g40008 BBM AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002296 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014417 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Spa_g13908 No alias RAM1-dependent transcription factor *(WRI5) & original... 0.03 OrthoFinder output from all 47 species
Tin_g10618 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!